Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015903848.1_cds_XP_016453998.1_48068
CDS Infomation

[gene=LOC107778289] [db_xref=GeneID:107778289] [protein=rab proteins geranylgeranyltransferase component A 2-like] [protein_id=XP_016453998.1] [location=complement(join(132431..132517,132733..132819,134315..134513,135002..135077,135199..135445,135560..135598,136541..136640,137355..137477,138015..138709))] [gbkey=CDS]
Sequence

ATGGATGAAACTGCGTCGTATCCTCCTATTGAACCATCCAATTTCGATCTTATAGTGGTC
GGCACCGGTCTGCCGGAGTCCATACTAGCCGCCGCCGCCGCCGCCGCCGGAAAATCAGTC
CTTCACCTCGACCCTAACCCTTCATACGGTAGCCACTATGCTTCTTTTCCCCTTCACGAA
TTCATTTCATATATCCAATCTCAATCCTCCTCCGAACCCTCAATTCCACAACCCGACGCC
GATTCGGGTTTTACCCGAGTTCCTCTAACCACCCGCTCGCTCTACTCCTCCGTAGAAATC
ACCTCTTACTCCTCGGAACCCTTGGAACAATCTCGAAAGTTTAACATTGATTTGAGTGGG
CCCAGGGTTTTGTTGTGTGCTGATGCTATGATTAATTTAATTTTGAAATCGGAGGTGAAT
CAGTACATGGAGTTCAAGAGCATTGACGGGAATTTTTTCTATGATGGTGAGGGCAATTTG
GAGAATGTACCTGATTCGCGTAGCGCGATATTTAAGGACCGGAAACTAAGCTTTACAGAG
AAGAATCAGTTGATGGGATTCTTCAAGCTGGTGCAAGGGCATTTTGAAGCTTTTGCTACT
GATGGTGGGGAGAGTAAGAGCATTTCAGAGGAGGATTTAGACAGTCCGTTTGTGGAGTTT
TTAAGCAAAATGGGGCTTTCTTCTAAGCTAAAATCGATTATTCTGTATGCAATAACAATG
GCAGATTATGACCAAGAGAATGGGGATGTTTGCAAAAGTGTTCTTAATACAAAAGATGGT
ATTGATCGGTTGGCCCTTTATCACTCATCCGTTGGCAGGTTTCCTAATGCATCTGGTGCT
ATGATTTACCCCATTTATGGTCAAGGGGAACTTCCACAGGCCTTTTGTCGTCGTGCTGCA
GTAAAAGGATGCATTTATGTTCTTCGGATGCCTGTTAATTCTCTCCTCATGGACAAGGCT
ACTGGGAATTACAAAGGTGTTCGCTTGGCTTCGGAACAAGAATTATTCAGCCATAAGCTG
ATATTAGCTCCATCTTTTGTGTTTCAATTACCACCACCTCATGCTTCACCTGATGCTCTG
CAAATTGTTTATTGTGATTTTGGCTCAAACAATACAACTGAGAAGCTGGCTAGGAGCGTA
TGCATCACAAAGCACTCTTTGAAATTGGATGTAGCCAATTGTTTGGCATTTTTTCCACCT
CGGTCTCTCTTCCCTGAGCAGGTCACAGCAATCCATGTCCTTCAGCTGAGTAGCAATGTT
GCTGTTTGCCCCTCTGGAATGTTTTTGACTTATCTCTCAGCCATATGTGAGGATGATGTT
CAGGGGAAGAAGCTATTACATGCAGCCATCAACGCACTGTTTTGCATTCCTGTTTCTGGA
AGTTCTGAAAATGATAATTCTGCGGAGAACCAAAGTGAAACTAGAGATGCAAAACCTGCT
TTACTTTGGAGTGTCTTGTATACTCAAGAGCTTGCTAAGTTTCAGGATGTACTAGATAAC
ATCATTTCTACCCCCATGCCAGATGGGAGTCCATACTACCACGATCTTCTGGGTGCTACA
GAAAAGATATTTGAAGAGCTTTACTCTGGTGAAGAATTCTTTCCCAAGACAGCCTCATCG
GAGGAGGGTGCTGTCGAAGAGCTCGAGGACTAG

Peptide Sequence

PEP ID

XP_016453998.1
PEP Infomation

PREDICTED: rab proteins geranylgeranyltransferase component A 2-like [Nicotiana tabacum]
Sequence

MDETASYPPIEPSNFDLIVVGTGLPESILAAAAAAAGKSVLHLDPNPSYGSHYASFPLHE
FISYIQSQSSSEPSIPQPDADSGFTRVPLTTRSLYSSVEITSYSSEPLEQSRKFNIDLSG
PRVLLCADAMINLILKSEVNQYMEFKSIDGNFFYDGEGNLENVPDSRSAIFKDRKLSFTE
KNQLMGFFKLVQGHFEAFATDGGESKSISEEDLDSPFVEFLSKMGLSSKLKSIILYAITM
ADYDQENGDVCKSVLNTKDGIDRLALYHSSVGRFPNASGAMIYPIYGQGELPQAFCRRAA
VKGCIYVLRMPVNSLLMDKATGNYKGVRLASEQELFSHKLILAPSFVFQLPPPHASPDAL
QIVYCDFGSNNTTEKLARSVCITKHSLKLDVANCLAFFPPRSLFPEQVTAIHVLQLSSNV
AVCPSGMFLTYLSAICEDDVQGKKLLHAAINALFCIPVSGSSENDNSAENQSETRDAKPA
LLWSVLYTQELAKFQDVLDNIISTPMPDGSPYYHDLLGATEKIFEELYSGEEFFPKTASS
EEGAVEELED

Transcript Sequence

Gene sequence data has not been registered.